1.厌氧发酵产甲烷的微生物过程及机制

2.合成微生物群落在生物质能源转化中的开发和应用

3.以One Health研究抗生素抗性基因及病原菌的传播和控制

4.环境及医学微生物组

1)   Lin,Q.,Li,L.,De Vrieze,J.,Li,C.,Fang,X. and Li,X. (2023) Functional conservation of microbial communities determines composition predictability in anaerobic digestion. The ISME Journal

2)   Lin, Q., De Vrieze, J., Li, L., Fang, X. and Li, X. (2023) Interconnected versus unconnected microorganisms: Does it matter in anaerobic digestion functioning. Journal of Environmental Management 331

3)   Lin, Q., De Vrieze, J., Fang, X., Li, L., and Li, X. (2022) Microbial life strategy with high rRNA operon copy number facilitates the energy and nutrient flux in anaerobic digestion. Water Research 226

4)   Lin, Q., Li, L., Fang, X., and Li, X. (2022) Substrate complexity affects the prevalence and interconnections of antibiotic, metal and biocide resistance genes, integron-integrase genes, human pathogens and virulence factors in anaerobic digestion. Journal of Hazardous Materials 438:129441

5)   Lin, Q.,Xavier, B B., Alako, B T F., Mitchell, A L., Rajakani, S G., Glupczynski, Y.,et al. (2022) Screening of global microbiomes implies ecological boundaries impacting the distribution and dissemination of clinically relevant antimicrobial resistance genes. Communications Biology 5:1217

6)   Lin, Q., Dini-Andreote, F., Meador, T B., Angel, R., Mesz ro ov , L., Hed nec, P., et al. (2022) Microbial phylogenetic relatedness links to distinct successional patterns of bacterial and fungal communities. Environmental Microbiology 24

7)   Lin, Q., De Vrieze, J., Fang, X., Li, L., and Li, X. (2022) Labile carbon feedstocks trigger a priming effect in anaerobic digestion: An insight into microbial mechanisms. Bioresource Technology 344

8)   Vlaeminck, J., Lin, Q., Xavier, B B., De Backer, S., Berkell, M., De Greve, H., et al. (2022) The dynamic transcriptome during maturation of biofilms formed by methicillin-resistant Staphylococcus aureus. Frontiers in Microbiology 2778. (并列一作)

9)   Lin, Q., Baldrian, P., Li,L.,Novotny, V., Hed nec, P., Kukla, J., et al. (2021) Dynamics of soil bacterial and fungal communities during the secondary succession following swidden agriculture in lowland forests. Frontiers in Microbiology 12

10)  Lin, Q., Dini-Andreote, F., Li, L., Umari, R., Novotny, V., Kukla, J., et al. (2021) Soil microbial interconnections along ecological restoration gradients of lowland forests after slash-and-burn agriculture. FEMS Microbiology Ecology 97

11)  Lin, Q., Li, L., Adams, J M., Hed nec, P., Tu, B., Li, C., et al. (2021) Nutrient resource availability mediates niche differentiation and temporal co-occurrence of soil bacterial communities. Applied Soil Ecology 103965

12)  Li, L., Lin, Q., Li, T., He, X., Peng, S., and Tao, Y. (2020) Transcriptional response of Pseudomonas chenduensis strain MBR to cadmium toxicity. Applied Microbiology and Biotechnology 104:9749-9757 (并列一作)

13)  Li, L., Lin, Q., Li, X.,Li, T.,He, X.,Li, D.,et al. (2019) Dynamics and potential roles of abundant and rare subcommunities in the bioremediation of cadmium-contaminated paddy soil by Pseudomonas chenduensis. Applied Microbiology and Biotechnology 103:8203-8214 (并列一作)

14)  Lin, Q., De Vrieze, J., Li, C., Li, J., Li, J., Yao, M.,et al. (2017) Temperature regulates deterministic processes and the succession of microbial interactions in anaerobic digestion process. Water Research 123:134-143

15)  Lin, Q., Fang, X.,Ho, A., Li, J., Yan, X., Tu, B., et al. (2017) Different substrate regimes determine transcriptional profiles and gene co-expression in Methanosarcina barkeri (DSM 800). Applied Microbiology and Biotechnology 101:7303-7316

16)  Lin, Q., De Vrieze,J.,He, G., Li, X., and Li, J. (2016) Temperature regulates methane production through the function centralization of microbial community in anaerobic digestion. Bioresource Technology 216:150-158

17)  Lin, Q., De Vrieze, J., Li, J., and Li, X. (2016) Temperature affects microbial abundance, activity and interactions in anaerobic digestion. Bioresource Technology 209: 228-236

18)  Lin, Q., He, G., Rui,J.,Fang, X., Tao, Y., Li,J.,et al. (2016) Microorganism-regulated mechanisms of temperature effects on the performance of anaerobic digestion. Microbial cell factories 15:96